The detailed information of tRNA gene sequence


Sequence ID>WENV170652123
Genome IDJRYG01114041
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 233
End posion on genome 149
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
cattgtttct
tRNA gene sequence 
GCGGGGATACTCAAGCGGTCAACGAGGTCTGACTGTAAATCAGATGGCTTAGCCTTCGGG
GGTTCAAATCCCTCTCCCTGCACCA
Downstream region at tRNA end position 
aaataagact
Secondary structure (Cloverleaf model)
>WENV170652123	Tyr	GTA
                   t      ACCA aaataagact
                     G - C
                     C - G
                     G + T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        A      | + | | |     A
    G       A C T C       G G G G G     C
    G         | | |                 T T
    T       C G A G
      C A A        G     TGGCTTAGCCTTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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