The detailed information of tRNA gene sequence


Sequence ID>WENV170652125
Genome IDJRYG01116008
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 112
End posion on genome 38
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ggacatccga
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTTAGAGCGCGTCTCTGATAAGGACGAGGTCCCTGGTTCGAG
TCCAGGATCGCCCACtt
Downstream region at tRNA end position 
tcccggtcag
Secondary structure (Cloverleaf model)
>WENV170652125	Ile	GAT
                   a      ACtt tcccggtcag
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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