The detailed information of tRNA gene sequence


Sequence ID>WENV170652126
Genome IDJRYG01116309
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 319
End posion on genome 394
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cgtccgccgc
tRNA gene sequence 
GTCCCCTTCGTCTAGCGGCCCAGGACGTCGCCCTCTCACGGCGAAAACAGGGGTTCGAGT
CCCCTAGGGGACGCCA
Downstream region at tRNA end position 
gcacttagcc
Secondary structure (Cloverleaf model)
>WENV170652126	Glu	CTC
                   c      GCCA gcacttagcc
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     T C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C C A        G     AAAC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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