The detailed information of tRNA gene sequence


Sequence ID>WENV170652137
Genome IDJRYG01131280
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 301
End posion on genome 377
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttttatttat
tRNA gene sequence 
CAGGGTTTGGGAAAGTTGGTTAATCCGCCTGTTTTGGAAACAGGAGAACGCAAGTTCAAG
TCTTGCAGCCCTGACCA
Downstream region at tRNA end position 
tatgttnnnn
Secondary structure (Cloverleaf model)
>WENV170652137	Pro	TGG
                   t      ACCA tatgttnnnn
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     T + G
                     T - A          T G
                    T     C G T T C     A
      T G A        G      | | | | |     A
    T       A A G G       G C A A G     C
    G         | | |                 T T
    G       A T C C
      T T A        G     AGAAC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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