The detailed information of tRNA gene sequence


Sequence ID>WENV170652151
Genome IDJRYG01146687
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 167
End posion on genome 252
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccaaattcat
tRNA gene sequence 
CGTGCAGTGGCCGAGCGGTTGAAGGCATCAGTCTGCAAAACTGAAGGCAATAGCCCACGA
CGGTTCGAATCCGTCCTGCACGTCCA
Downstream region at tRNA end position 
gtttcaatgg
Secondary structure (Cloverleaf model)
>WENV170652151	Cys	GCA
                   t      TCCA gtttcaatgg
                     C - G
                     G - C
                     T - A
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     C T G C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A C G G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     AGGCAATAGCCCAC
                    T - A
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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