The detailed information of tRNA gene sequence


Sequence ID>WENV170652154
Genome IDJRYG01150779
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 135
End posion on genome 46
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attgcagtaa
tRNA gene sequence 
GGAGGGGTCGCATAGCTGGTCCATTGCGGGGGATTGCTAATCCCCTGAGTAGAAATACTC
ACGTGGGTTCAAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
agaattactt
Secondary structure (Cloverleaf model)
>WENV170652154	Ser	GCT
                   a      GCCA agaattactt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C A C C C     A
    T C G A        C      | | | | |     A
  G         T A C G       G T G G G     C
  G           | | |                 T T
  T         T T G C
    C C A          G     TGAGTAGAAATACTCAC
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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