The detailed information of tRNA gene sequence


Sequence ID>WENV170652174
Genome IDJRYG01163310
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 317
End posion on genome 393
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gaatgattct
tRNA gene sequence 
GGACTCGTAGCTCAGTTGGTTAGAGCGTGGCATTGACATCGCCAAGGTCAGAGGTTCGAC
TCCTCTCGGGTCCACTA
Downstream region at tRNA end position 
aatggtaatt
Secondary structure (Cloverleaf model)
>WENV170652174	Val	GAC
                   t      ACTA aatggtaatt
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     C - G
                     G - C          T C
                    T     T C T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    G - C
                    G - C
                    C - G
                    A   C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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