The detailed information of tRNA gene sequence


Sequence ID>WENV170652175
Genome IDJRYG01164397
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 145
End posion on genome 53
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgctcttaT
tRNA gene sequence 
GGAGGCATGGCCGAGTGGCTGTAGGCGGCTGGTTGCTAAACCGTTATAGGGGCTAAAACT
TCTATCGAAGGTTCGAATCCTTCTGCCTCCGTtt
Downstream region at tRNA end position 
tcttttaccg
Secondary structure (Cloverleaf model)
>WENV170652175	Ser	GCT
                   T      GTtt tcttttaccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     C T T C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A A G G     C
    G         | | |                 T T
    C       A G G C
      T G T        G     TATAGGGGCTAAAACTTCTATC
                    G + T
                    C - G
                    T   C
                    G - C
                    G   A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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