The detailed information of tRNA gene sequence


Sequence ID>WENV170652182
Genome IDJRYG01167017
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 383
End posion on genome 458
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agcagttcga
tRNA gene sequence 
AGGGGTGTAGCTCAGCTGGTAGAGCACCCGCCTCCAAAGTGGGCGGTCGCGGGTTCGAAT
CCTGCCACCCCTGCCC
Downstream region at tRNA end position 
tgcttcttgg
Secondary structure (Cloverleaf model)
>WENV170652182	Trp	CCA
                   a      GCCC tgcttcttgg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTC
                    C - G
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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