The detailed information of tRNA gene sequence


Sequence ID>WENV170652189
Genome IDJRYG01178780
Search identical group
Phylum/Class[JRYG] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 196
End posion on genome 269
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccccacctcc
tRNA gene sequence 
GGCGGGTTGGCGGAGAGGTTACGCAGCGGATTGCAAATCCGTGTAGACCGGTTCGATTCC
GGTACCCGCCTCCA
Downstream region at tRNA end position 
ggcttcctca
Secondary structure (Cloverleaf model)
>WENV170652189	Cys	GCA
                   c      TCCA ggcttcctca
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T T
                    T     T G G C C     A
        G A        G      | | | | |     G
      A     G G C G       A C C G G     C
      G       | | |                 T T
      G     A C G C
        T T        A     GTAG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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