The detailed information of tRNA gene sequence


Sequence ID>WENV170652195
Genome IDJRYH01000040
Search identical group
Phylum/Class[JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and
Species
Start position on genome 16673
End posion on genome 16597
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtccgatgga
tRNA gene sequence 
GGCTCCTTAGCTCAGTTGGTTAGAGCGGTGGAATCATAATCCATGTGTCCCCAGTTCGAG
TCTGGGAGGAGCCACCA
Downstream region at tRNA end position 
ttttccccct
Secondary structure (Cloverleaf model)
>WENV170652195	Met	CAT
                   a      ACCA ttttccccct
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T - A          T G
                    T     G G G T C     A
      T G A        A      | | | | |     G
    T       C T C G       C C C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     GTGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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