The detailed information of tRNA gene sequence


Sequence ID>WENV170652225
Genome IDJRYH01000147
Search identical group
Phylum/Class[JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and
Species
Start position on genome 40312
End posion on genome 40401
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cggacagcac
tRNA gene sequence 
GGAGGGTTGGCAGAGCGGTTGATTGCACTGGTCTTGAAAACCAGCAAGGGTGCAAGCCCT
TCCGGGGTTCGAATCCCCGACCCTCCGCCA
Downstream region at tRNA end position 
tttaatgcgt
Secondary structure (Cloverleaf model)
>WENV170652225	Ser	TGA
                   c      GCCA tttaatgcgt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     G C C C C     A
      C G A        G      | | | | |     G
    G       G A C G       C G G G G     C
    G       + | | |                 T T
    T       T T G C
      T G A        A     CAAGGGTGCAAGCCCTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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