The detailed information of tRNA gene sequence


Sequence ID>WENV170652230
Genome IDJRYH01000179
Search identical group
Phylum/Class[JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and
Species
Start position on genome 26640
End posion on genome 26730
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcgcgcgct
tRNA gene sequence 
GGAGACGTGGCCGAGAGGCTGAAGGCGGCGGTTTGCTAAATCGTTATACCCCCAAAGGGT
ATCAGGGGTTCGAATCCCCTCGTCTCCGCCA
Downstream region at tRNA end position 
agcgattnnn
Secondary structure (Cloverleaf model)
>WENV170652230	Ser	GCT
                   t      GCCA agcgattnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C C C C     A
      A G A        G      | | | | |     G
    G       G C C G       A G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACCCCCAAAGGGTATC
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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