The detailed information of tRNA gene sequence


Sequence ID>WENV170652233
Genome IDJRYH01000193
Search identical group
Phylum/Class[JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and
Species
Start position on genome 17225
End posion on genome 17150
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tatacggccc
tRNA gene sequence 
GCTCCCTTCGTCTAGTGGCCCAGGACGTCGCCCTCTCAAGGCGAAAACACGAGTTCGAGT
CTCGTAGGGAGCGCCA
Downstream region at tRNA end position 
gtttgcgcct
Secondary structure (Cloverleaf model)
>WENV170652233	Glu	CTC
                   c      GCCA gtttgcgcct
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     T G C T C     A
      T G A        C      | | | | |     G
    G       T C T G       A C G A G     C
    G       + | | |                 T T
    C       G G A C
      C C A        G     AAAC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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