The detailed information of tRNA gene sequence


Sequence ID>WENV170652335
Genome IDJRYH01000983
Search identical group
Phylum/Class[JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and
Species
Start position on genome 27764
End posion on genome 27669
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gcatgggcat
tRNA gene sequence 
GGAGGAGTCCCGTCCCCGGTGGGGCGACCGGTCTTCAAAACCGGGTGGGGCCGTGAGACG
GCTTCAGGTGGGTTCGACTCCCATCCTCCTCCGCCA
Downstream region at tRNA end position 
tcctctcagc
Secondary structure (Cloverleaf model)
>WENV170652335	SeC(p)	TCA
                   t      GCCA tcctctcagc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T   C          T C
                    C     T A C C C     A
      C C C        C      + | | | |     G
    G       C T G C       G T G G G     C
    G       | + | |                 T T
    T       G G C G
      G G          A     GTGGGGCCGTGAGACGGCTTCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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