The detailed information of tRNA gene sequence


Sequence ID>WENV170652394
Genome IDJRYH01002063
Search identical group
Phylum/Class[JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and
Species
Start position on genome 11845
End posion on genome 11920
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgtgcgaaat
tRNA gene sequence 
AGGGGTGTAGCTCAATTGGCAGAGCGTCGGTCTCCAAAACCGAAGGCTGGGGGTTCGAGA
CCCTCCACCCCTGCCA
Downstream region at tRNA end position 
cgaggtttgt
Secondary structure (Cloverleaf model)
>WENV170652394	Trp	CCA
                   t      GCCA cgaggtttgt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          A G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGCT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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