The detailed information of tRNA gene sequence


Sequence ID>WENV170652491
Genome IDJRYH01004820
Search identical group
Phylum/Class[JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and
Species
Start position on genome 33210
End posion on genome 33305
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gcagaagcat
tRNA gene sequence 
GGAGGAGTCCCGTCCCCGGTGGGGCGACCGGTCTTCAAAACCGGGTGGGGCCGTCAGACG
GTCTCAGGTGGGTTCGACTCCCATCCTCCTCCGCCA
Downstream region at tRNA end position 
tcctctcccg
Secondary structure (Cloverleaf model)
>WENV170652491	SeC(p)	TCA
                   t      GCCA tcctctcccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T   C          T C
                    C     T A C C C     A
      C C C        C      + | | | |     G
    G       C T G C       G T G G G     C
    G       | + | |                 T T
    T       G G C G
      G G          A     GTGGGGCCGTCAGACGGTCTCAG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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