The detailed information of tRNA gene sequence


Sequence ID>WENV170652521
Genome IDJRYH01005205
Search identical group
Phylum/Class[JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and
Species
Start position on genome 6544
End posion on genome 6618
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gaacgatcag
tRNA gene sequence 
GATCCGATGGCTGAGCGGCAAAGGCACCGGTCTGCAAAACCGGCCACGTCGGTTCGACTC
CGACTCGGATCTCCA
Downstream region at tRNA end position 
cgacagcgat
Secondary structure (Cloverleaf model)
>WENV170652521	Cys	GCA
                   g      TCCA cgacagcgat
                     G - C
                     A - T
                     T - A
                     C - G
                     C - G
                     G - C
                     A - T          T C
                    T     C A G C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T C G G     C
    G         + | |                 T T
    C       A G G C
      A A          A     CCAC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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