The detailed information of tRNA gene sequence


Sequence ID>WENV170652540
Genome IDJRYH01005432
Search identical group
Phylum/Class[JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and
Species
Start position on genome 2393
End posion on genome 2317
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcctgaaggc
tRNA gene sequence 
GGGCCTGTAGCTCAATTGGTCAGAGCAGAGCGCTCATAACGCTTTGGTTGGGGGTTCGAG
TCCCTCCGGGCCTACCA
Downstream region at tRNA end position 
atttctcgtt
Secondary structure (Cloverleaf model)
>WENV170652540	Met	CAT
                   c      ACCA atttctcgtt
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     TGGTT
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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