The detailed information of tRNA gene sequence


Sequence ID>WENV170652549
Genome IDJRYH01005626
Search identical group
Phylum/Class[JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and
Species
Start position on genome 1486
End posion on genome 1575
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cccccgatgc
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGTCGAACGGGGCGGTCTCGAAAACCGTTGTGGGTGTGAGCCCA
CCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
cttctatcag
Secondary structure (Cloverleaf model)
>WENV170652549	Ser	CGA
                   c      GCCA cttctatcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGTGGGTGTGAGCCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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