The detailed information of tRNA gene sequence


Sequence ID>WENV170652551
Genome IDJRYH01005796
Search identical group
Phylum/Class[JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and
Species
Start position on genome 1654
End posion on genome 1746
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ataaccatcc
tRNA gene sequence 
GGAGACGTGGCCGAGAGGCTGAAGGCGGCGGTTTGCTAAATCGTTATACCCTCTAAAGGG
GTATCAGGGGTTCGAATCCCCTCGTCTCCGCCA
Downstream region at tRNA end position 
ttttacattt
Secondary structure (Cloverleaf model)
>WENV170652551	Ser	GCT
                   c      GCCA ttttacattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C C C C     A
      A G A        G      | | | | |     G
    G       G C C G       A G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACCCTCTAAAGGGGTATC
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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