The detailed information of tRNA gene sequence


Sequence ID>WENV170652620
Genome IDJRYH01009281
Search identical group
Phylum/Class[JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and
Species
Start position on genome 4346
End posion on genome 4441
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gagagcgctc
tRNA gene sequence 
GGAGGCGTTTAGGTTCCTGGTGGTCCTCCCGGTCTTCAAAACCGGTGAGACCGAGTAGCT
CGGTCTGGCAGGTTCGATTCCTGTCCGCCTCCGCCA
Downstream region at tRNA end position 
atcgctgcaa
Secondary structure (Cloverleaf model)
>WENV170652620	SeC(p)	TCA
                   c      GCCA atcgctgcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    T     T G T C C     A
      C C T        T      + | | | |     G
    T       T G G A       G C A G G     C
    G         | | |                 T T
    G       T C C T
      T G G        C     TGAGACCGAGTAGCTCGGTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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