The detailed information of tRNA gene sequence


Sequence ID>WENV170652640
Genome IDJRYH01010552
Search identical group
Phylum/Class[JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and
Species
Start position on genome 1105
End posion on genome 1015
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccggcttccc
tRNA gene sequence 
GGACAGGTGGATGAGTGGTTTAAGTCGCACGCCTGGAAAGCGTGTTCAGGGTAATACCCT
GACGCGGGTTCGAATCCCGCCCTGTCCGCCA
Downstream region at tRNA end position 
gaatcatcga
Secondary structure (Cloverleaf model)
>WENV170652640	Ser	GGA
                   c      GCCA gaatcatcga
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TTCAGGGTAATACCCTGAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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