The detailed information of tRNA gene sequence


Sequence ID>WENV170652698
Genome IDJRYH01016251
Search identical group
Phylum/Class[JRYH] activated sludge metagenome; activated biomass of a wastewater treatment plant treating wastewater generated at dyes and
Species
Start position on genome 809
End posion on genome 905
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ccgctccgat
tRNA gene sequence 
GGAAGAGAGGCGTTCCCCGGTGGGGCGACTGGTCTTCAAAACCAGGTGGGGCCGCCAGCC
GGTCCCAGGTGGGTTCGACTCCCATTCTCTTCCGCCA
Downstream region at tRNA end position 
tacctcttct
Secondary structure (Cloverleaf model)
>WENV170652698	SeC(p)	TCA
                   t      GCCA tacctcttct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    G     T A C C C     A
      C C C        G      + | | | |     G
    C       T T G C       G T G G G     C
    G       + + | |                 T T
    G       G G C G
      T G G        A     GTGGGGCCGCCAGCCGGTCCCAG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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