The detailed information of tRNA gene sequence


Sequence ID>WENV170653440
Genome IDJRYJ01000893
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 8540
End posion on genome 8613
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gccgggaatt
tRNA gene sequence 
GGGGCGGTAGCTCAGCTGGGAGAGCGCTGCAATCGCACTGCAGAGGTCGAGAGTTCGAAT
CTCTTCCGCTCCACtt
Downstream region at tRNA end position 
gccgttgtcc
Secondary structure (Cloverleaf model)
>WENV170653440	Ala	CGC
                   t      ACtt gccgttgtcc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     T T C T C     A
      C G A        A      + | | | |     G
    T       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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