The detailed information of tRNA gene sequence


Sequence ID>WENV170653460
Genome IDJRYJ01001430
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 11256
End posion on genome 11166
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
gcgccttcgc
tRNA gene sequence
GGAGAGGTGGATGAGCGGTTTAAGTCGCACGCCTGGAAAGCGTGTGTGGGTTAATAGCCC
ACCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position
ggattcggaa
Secondary structure (Cloverleaf model)
>WENV170653460	Ser	GGA
                   c      GCCA ggattcggaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGTGGGTTAATAGCCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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