The detailed information of tRNA gene sequence


Sequence ID>WENV170653470
Genome IDJRYJ01001592
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 6799
End posion on genome 6710
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaccgtcgcc
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCACCGCTTTGCTAAAGCGGCGTAGGGGTCAAACTC
TACCGCGGGTTCGAATCCCGCCCTCTCCGCat
Downstream region at tRNA end position 
tttgagagcc
Secondary structure (Cloverleaf model)
>WENV170653470	Ser	GCT
                   c      GCat tttgagagcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G C G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        A     CGTAGGGGTCAAACTCTACC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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