The detailed information of tRNA gene sequence


Sequence ID>WENV170653479
Genome IDJRYJ01001950
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 40875
End posion on genome 40962
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cggcttccgg
tRNA gene sequence 
GGAAGCGTGGGGGAGCGGTTTAACCCAGCTGTCTTGAAAACAGCCGACTCGCAAGGGTCC
GTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
gccgccgggt
Secondary structure (Cloverleaf model)
>WENV170653479	Ser	TGA
                   g      GCCA gccgccgggt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G G G G       G T G A G     C
    G         | | |                 T T
    T       A C C C
      T T A        A     CGACTCGCAAGGGTCC
                    G - C
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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