The detailed information of tRNA gene sequence


Sequence ID>WENV170653483
Genome IDJRYJ01002067
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 626
End posion on genome 539
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gacgcggacc
tRNA gene sequence 
GGAGGGGTGGCAGAGCGGTCGAATGCATCGGTCTTGAAAACCGACAACGGGGCAACTCGT
TCGCGGGTTCGAATCCCGCCCCCTCCGCtc
Downstream region at tRNA end position 
ggcgatcagt
Secondary structure (Cloverleaf model)
>WENV170653483	Ser	TGA
                   c      GCtc ggcgatcagt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G C G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        A     CAACGGGGCAACTCGTTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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