The detailed information of tRNA gene sequence


Sequence ID>WENV170653485
Genome IDJRYJ01002197
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 21979
End posion on genome 22071
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgccctctcc
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCATAACGGCGCCGACTCGAAATCGGATGGTCAGGGAAACCT
GGCACAAGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
gtttcaagtg
Secondary structure (Cloverleaf model)
>WENV170653485	Ser	CGA
                   c      GCCA gtttcaagtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       A A G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          C     TGGTCAGGGAAACCTGGCAC
                    G   A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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