The detailed information of tRNA gene sequence


Sequence ID>WENV170653488
Genome IDJRYJ01002217
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 25205
End posion on genome 25116
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtccattcgc
tRNA gene sequence 
GGAGAGGTGCGAGAGTGGACGAATCGACATGCTTGGAAAGCATGCGTCCCGGCAACGGGA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
aactgagctt
Secondary structure (Cloverleaf model)
>WENV170653488	Ser	GGA
                   c      GCCA aactgagctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G         | | |                 T T
    A       A T C G
      C G A        A     CGTCCCGGCAACGGGACC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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