The detailed information of tRNA gene sequence


Sequence ID>WENV170653500
Genome IDJRYJ01002615
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 4260
End posion on genome 4185
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cggtcggtgt
tRNA gene sequence 
GGGGCTGTGGCGCAGTTGGGAGCGCGCGTGAATGGCATTCACGAGGTCGCCGGTTCAATC
CCGGCCAGCTCCACCA
Downstream region at tRNA end position 
aacctcgctt
Secondary structure (Cloverleaf model)
>WENV170653500	Ala	GGC
                   t      ACCA aacctcgctt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     C G G C C     A
      T G A        G      | | | | |     A
    T       C G C G       G C C G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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