The detailed information of tRNA gene sequence


Sequence ID>WENV170653513
Genome IDJRYJ01003592
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 4905
End posion on genome 4829
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccgcgccgc
tRNA gene sequence 
GGCGGAGTAGCTCAGTTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGGGTTCGAG
TCCCTCCTCCGCTACCT
Downstream region at tRNA end position 
cacgaaagcc
Secondary structure (Cloverleaf model)
>WENV170653513	Met	CAT
                   c      ACCT cacgaaagcc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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