The detailed information of tRNA gene sequence


Sequence ID>WENV170653535
Genome IDJRYJ01004761
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 237
End posion on genome 312
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggacgccttt
tRNA gene sequence 
AGGGGTGTAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGGGGGTTCGAGT
CCCTCCACTCCTGCCA
Downstream region at tRNA end position 
cgccgccttt
Secondary structure (Cloverleaf model)
>WENV170653535	Trp	CCA
                   t      GCCA cgccgccttt
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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