The detailed information of tRNA gene sequence


Sequence ID>WENV170653547
Genome IDJRYJ01005272
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1132
End posion on genome 1047
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tacttccccc
tRNA gene sequence 
GGAGGGCTGGCAGAACGGCTAATGCACCGGTCTTGAAAACCGGCGTCCGAAAGGACTTGG
GGGTTCGAATCCCTCGCCCTCCGCCA
Downstream region at tRNA end position 
ccaattatca
Secondary structure (Cloverleaf model)
>WENV170653547	Ser	TGA
                   c      GCCA ccaattatca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     C T C C C     A
      C A A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    C       A T G C
      T A          A     CGTCCGAAAGGACTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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