The detailed information of tRNA gene sequence


Sequence ID>WENV170653551
Genome IDJRYJ01005517
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1846
End posion on genome 1756
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaagaacacc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGAATGCGCCGGACTCGAAATCCGGTATACGGTTTCACCGT
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gtgacaccgc
Secondary structure (Cloverleaf model)
>WENV170653551	Ser	CGA
                   c      GCCA gtgacaccgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TATACGGTTTCACCGTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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