The detailed information of tRNA gene sequence


Sequence ID>WENV170653560
Genome IDJRYJ01006202
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1134
End posion on genome 1059
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggtaagcagc
tRNA gene sequence 
AGGGCAATAGCTCAACTGGCAGAGCGTCGGTCTCCAAAACCGAAGGTTGGGGGTTCGATT
CCCTCTTGCCCTGCCA
Downstream region at tRNA end position 
cctgcactga
Secondary structure (Cloverleaf model)
>WENV170653560	Trp	CCA
                   c      GCCA cctgcactga
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T          T T
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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