The detailed information of tRNA gene sequence


Sequence ID>WENV170653562
Genome IDJRYJ01006304
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 555
End posion on genome 468
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcatcgacgc
tRNA gene sequence 
GGAGGTGTGGCAGAGTGGTCGATTGCACCGGTCTTGAAAACCGGCAACGGGCAACCGTTC
GTGAGTTCGAATCTCACCGCCTCCGCCA
Downstream region at tRNA end position 
gtggcctagt
Secondary structure (Cloverleaf model)
>WENV170653562	Ser	TGA
                   c      GCCA gtggcctagt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G       + | | |                 T T
    T       T T G C
      C G A        A     CAACGGGCAACCGTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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