The detailed information of tRNA gene sequence


Sequence ID>WENV170653591
Genome IDJRYJ01010028
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2551
End posion on genome 2478
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cagcgccccc
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGGAGAGCGCCGCCTTTGCAAGGCGGAGGTCAGGGGTTCGAGC
CCCCTATCCTCCACtg
Downstream region at tRNA end position 
ccctgtcggc
Secondary structure (Cloverleaf model)
>WENV170653591	Ala	TGC
                   c      ACtg ccctgtcggc
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     A - T
                     T - A          C G
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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