The detailed information of tRNA gene sequence


Sequence ID>WENV170653592
Genome IDJRYJ01010281
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 936
End posion on genome 1012
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgcgggctca
tRNA gene sequence 
GGCGCTTTAGCTCAGTCGGTTAGAGCGACGGAATCATAATCCGCAGGTCCGGGGTTCGAG
TCCCTGAAGCGCCACCA
Downstream region at tRNA end position 
gaactccccg
Secondary structure (Cloverleaf model)
>WENV170653592	Met	CAT
                   a      ACCA gaactccccg
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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