The detailed information of tRNA gene sequence


Sequence ID>WENV170653613
Genome IDJRYJ01014011
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 3363
End posion on genome 3437
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggcgcagatT
tRNA gene sequence 
GGCGGGGTAGCTCAGTGGTTAGAGCAGGGTCTTCATAAGGCCAAGGTCGCCGGTTCAAAT
CCGGCCCCCGCTATtt
Downstream region at tRNA end position 
gtttttgcga
Secondary structure (Cloverleaf model)
>WENV170653613	Met	CAT
                   T      ATtt gtttttgcga
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G C C     A
      T G A        A      | | | | |     A
    G       C T C G       G C C G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     AGGTC
                    G   A
                    G - C
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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