The detailed information of tRNA gene sequence


Sequence ID>WENV170653623
Genome IDJRYJ01016988
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 6667
End posion on genome 6595
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccattaacaa
tRNA gene sequence 
AGGGGTGTAGCTCAATTGGTAGAGCACTGGTCTCCAAAACCAGCGGTTGAGCGTTCGAGT
CGCTCCGCCCCTGttg
Downstream region at tRNA end position 
gcgattgatc
Secondary structure (Cloverleaf model)
>WENV170653623	Trp	CCA
                   a      Gttg gcgattgatc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     C T C G C     A
      T A A        A      | | | | |     G
    T       C T C G       G A G C G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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