The detailed information of tRNA gene sequence


Sequence ID>WENV170653639
Genome IDJRYJ01022394
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 485
End posion on genome 574
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctcggcgcag
tRNA gene sequence 
GGATGGGTGGCAGAGCGGTTGAATGCACCGGTCTTGAAAACCGGCAAGGGGGCGACTCCT
TCGTGGGTTCGAATCCCACCCCATCCGCCA
Downstream region at tRNA end position 
gccccgcaaa
Secondary structure (Cloverleaf model)
>WENV170653639	Ser	TGA
                   g      GCCA gccccgcaaa
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CAAGGGGGCGACTCCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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