The detailed information of tRNA gene sequence


Sequence ID>WENV170653660
Genome IDJRYJ01027138
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 3872
End posion on genome 3964
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgtgagcccc
tRNA gene sequence 
GGAGAGATGCCCGAGAGGCCGAAGGGGGCGCCCTGCTAAGGCGTTATACGGGCAAAACCC
GTATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gatacgagag
Secondary structure (Cloverleaf model)
>WENV170653660	Ser	GCT
                   c      GCCA gatacgagag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    C       A G G G
      C G A        G     TATACGGGCAAAACCCGTATC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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