The detailed information of tRNA gene sequence


Sequence ID>WENV170653690
Genome IDJRYJ01038275
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 132
End posion on genome 58
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
cctcagcttt
tRNA gene sequence 
GGAGCTATCGTCTAATGGCCAGGATAGCGGGTTCTCAGCCCGTTGATCAGGGTTCAAATC
CCTGTAGCTCTACCA
Downstream region at tRNA end position 
ccacaagttg
Secondary structure (Cloverleaf model)
>WENV170653690	Glu	CTC
                   t      ACCA ccacaagttg
                     G + T
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     G T C C C     A
      T A A        C      | | | | |     A
    G       T C T G       C A G G G     C
    G       + | | +                 T T
    C       G G A T
      C A          A     TGAT
                    G + T
                    C - G
                    G - C
                    G - C
                    G - C
                  T       G
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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