The detailed information of tRNA gene sequence


Sequence ID>WENV170653693
Genome IDJRYJ01040804
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 837
End posion on genome 913
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tttccccggt
tRNA gene sequence 
CGGGGTGTAGCGCAGTCTGGTAGCGCGCGGCGCTTGGGACGCCGAGGTCGGAGGTTCGAT
CCCTCTCACCCCGACCA
Downstream region at tRNA end position 
cgcttcatat
Secondary structure (Cloverleaf model)
>WENV170653693	Pro	TGG
                   t      ACCA cgcttcatat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          C T
                    T     T C T C C     A
      T G A        A      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    C - G
                    G - C
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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