The detailed information of tRNA gene sequence


Sequence ID>WENV170653696
Genome IDJRYJ01043778
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 2318
End posion on genome 2407
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcctcgctgc
tRNA gene sequence 
GGAGGTGTGGCAGAGCGGTTGAATGCACCGGTCTTGAAAACCGGCGAGGGTGAGAGCCCT
TCGTGAGTTCGAATCTCACCCCCTCCGCCA
Downstream region at tRNA end position 
nnacgggttc
Secondary structure (Cloverleaf model)
>WENV170653696	Ser	TGA
                   c      GCCA nnacgggttc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T   C
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CGAGGGTGAGAGCCCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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