The detailed information of tRNA gene sequence


Sequence ID>WENV170653700
Genome IDJRYJ01045897
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 319
End posion on genome 234
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atttgatttT
tRNA gene sequence 
GGAGAGGTCGCCTAATGGTATGGCACCGCGTTGGAAGCGCGGCGGGTCGAAAGGCCTGTG
GGGGTTCGAGTCCCCCTCTCTCCGTtc
Downstream region at tRNA end position 
ccaactttgc
Secondary structure (Cloverleaf model)
>WENV170653700	Ser	GGA
                   T      GTtc ccaactttgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T G
                    T     C C C C C     A
        A A        C      | | | | |     G
      T     T C C G       G G G G G     C
      G       | | |                 T T
      G     T G G C
        T A        A     CGGGTCGAAAGGCCTGT
                    C - G
                    C - G
                    G - C
                    C - G
                    G - C
                  T       G
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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