The detailed information of tRNA gene sequence


Sequence ID>WENV170653702
Genome IDJRYJ01046536
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 263
End posion on genome 340
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcatcaagat
tRNA gene sequence 
GGGCTCGTAGTGAAGCTGGCCTAACACGCCTCCCTGTCACGGAGGAGATCGCCGGTTCAA
ATCCGGTCGGGCCCGCCA
Downstream region at tRNA end position 
tagaaaacgc
Secondary structure (Cloverleaf model)
>WENV170653702	Asp	GTC
                   t      GCCA tagaaaacgc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     T G G C C     A
    T C G A        A      + | | | |     A
  G         A G T G       G C C G G     C
  G           | | |                 T T
  C         A C A C
    C T A          G     AGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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