The detailed information of tRNA gene sequence


Sequence ID>WENV170653715
Genome IDJRYJ01052379
Search identical group
Phylum/Class[JRYJ] activated sludge metagenome; activated biomass of a wastewater treatment plant treating hydrocarbon contaminated
Species
Start position on genome 1603
End posion on genome 1690
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtatatatct
tRNA gene sequence 
GGAGAGGTCGCATAGTGGCCTAGTGCGCACGCTTGGAAAGCGCGTATATCGCAAGATATC
GGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
gttttcaatt
Secondary structure (Cloverleaf model)
>WENV170653715	Ser	GGA
                   t      GCCA gttttcaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G G G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TATATCGCAAGATATC
                    C - G
                    A   C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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